Figure 3.

Different features comprising metabolic logic in the UM-PPS: A) Each biotransformation rule has an associated, color-coded aerobic likelihood assigned by content experts; B) Relative reasoning is applied when a biotransformation rule take precedence over another; C) Super rules combine metabolic steps when warranted, based on existing biodegradation knowledge; D) Variable aerobic likelihood is used to distinguish the likelihood of rules based on structural characteristics of the compound. For more information on the UM-PPS, see http://umbbd.msi.umn.edu/predict/aboutPPS.html webcite.

Ellis and Wackett Microbial Informatics and Experimentation 2012 2:1   doi:10.1186/2042-5783-2-1
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