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Beginner’s guide to comparative bacterial genome analysis using next-generation sequence data
David J Edwards, Kathryn E Holt Microbial Informatics and Experimentation 2013, 3:2 (10 April 2013)
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An efficient rRNA removal method for RNA sequencing in GC-rich bacteria
Clelia Peano, Alessandro Pietrelli, Clarissa Consolandi, Elio Rossi, Luca Petiti, Letizia Tagliabue, Gianluca De Bellis, Paolo Landini Microbial Informatics and Experimentation 2013, 3:1 (7 January 2013)
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Bioinformatic identification of Mycobacterium tuberculosis proteins likely to target host cell mitochondria: virulence factors?
María Maximina Bertha Moreno-Altamirano, Iris Selene Paredes-González, Clara Espitia, Mauricio Santiago-Maldonado, Rogelio Hernández-Pando, Francisco Javier Sánchez-García Microbial Informatics and Experimentation 2012, 2:9 (22 December 2012)
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Analysis of evolutionary patterns of genes in Campylobacter jejuni and C. coli
Lars Snipen, Trudy M Wassenaar, Eric Altermann, Jonathan Olson, Sophia Kathariou, Karin Lagesen, Monica Takamiya, Susanne Knøchel, David W Ussery, Richard J Meinersmann Microbial Informatics and Experimentation 2012, 2:8 (28 August 2012)
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Computational genomics-proteomics and Phylogeny analysis of twenty one mycobacterial genomes (Tuberculosis & non Tuberculosis strains)
Fathiah Zakham, Othmane Aouane, David Ussery, Abdelaziz Benjouad, Moulay Ennaji Microbial Informatics and Experimentation 2012, 2:7 (28 August 2012)
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Bacterial phylogenetic tree construction based on genomic translation stop signals
Lijing Xu, Jimmy Kuo, Jong-Kang Liu, Tit-Yee Wong Microbial Informatics and Experimentation 2012, 2:6 (31 May 2012)
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Growth comparison of several Escherichia coli strains exposed to various concentrations of lactoferrin using linear spline regression
Camilla Sekse, Jon Bohlin, Eystein Skjerve, Gerd E Vegarud Microbial Informatics and Experimentation 2012, 2:5 (16 April 2012)
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Mycobacterium tuberculosis and Clostridium difficille interactomes: demonstration of rapid development of computational system for bacterial interactome prediction
Seshan Ananthasubramanian, Rahul Metri, Ankur Khetan, Aman Gupta, Adam Handen, Nagasuma Chandra, Madhavi Ganapathiraju Microbial Informatics and Experimentation 2012, 2:4 (21 March 2012)
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Metagenomics - a guide from sampling to data analysis
Torsten Thomas, Jack Gilbert, Folker Meyer Microbial Informatics and Experimentation 2012, 2:3 (9 February 2012)
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Linear normalised hash function for clustering gene sequences and identifying reference sequences from multiple sequence alignments
Manal Helal, Fanrong Kong, Sharon CA Chen, Fei Zhou, Dominic E Dwyer, John Potter, Vitali Sintchenko Microbial Informatics and Experimentation 2012, 2:2 (26 January 2012)
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Use of the University of Minnesota Biocatalysis/Biodegradation Database for study of microbial degradation
Lynda BM Ellis, Lawrence P Wackett Microbial Informatics and Experimentation 2012, 2:1 (4 January 2012)
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Stringent response of Escherichia coli: revisiting the bibliome using literature mining
Sónia Carneiro, Anália Lourenço, Eugénio C Ferreira, Isabel Rocha Microbial Informatics and Experimentation 2011, 1:14 (30 December 2011)
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PerPlot & PerScan: tools for analysis of DNA curvature-related periodicity in genomic nucleotide sequences
Jan Mrázek, Tejas Chaudhari, Aryabrata Basu Microbial Informatics and Experimentation 2011, 1:13 (28 November 2011)
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Prediction of a novel RNA binding domain in crocodilepox Zimbabwe Gene 157
Nicole S Little, Taylor Quon, Chris Upton Microbial Informatics and Experimentation 2011, 1:12 (21 November 2011)
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Natural genetic engineering: intelligence & design in evolution?
David W Ussery Microbial Informatics and Experimentation 2011, 1:11 (31 October 2011)
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Translational web robots for pathogen genome analysis
Vitali Sintchenko, Enrico W Coiera Microbial Informatics and Experimentation 2011, 1:10 (31 October 2011)
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Quantifying the effect of environment stability on the transcription factor repertoire of marine microbes
Ivaylo Kostadinov, Renzo Kottmann, Alban Ramette, Jost Waldmann, Pier Luigi Buttigieg, Frank Glöckner Microbial Informatics and Experimentation 2011, 1:9 (7 September 2011)
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The zinc-ribbon domain of Helicobacter pylori HP0958: requirement for RpoN accumulation and possible roles of homologs in other bacteria
Lara E Pereira, Jennifer Tsang, Jan Mrázek, Timothy R Hoover Microbial Informatics and Experimentation 2011, 1:8 (23 August 2011)
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Where the bugs are: analyzing distributions of bacterial phyla by descriptor keyword search in the nucleotide database
Andrea Squartini Microbial Informatics and Experimentation 2011, 1:7 (26 July 2011)
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Large-scale experimental studies show unexpected amino acid effects on protein expression and solubility in vivo in E. coli
W Nicholson Price, Samuel K Handelman, John K Everett, Saichiu N Tong, Ana Bracic, Jon D Luff, Victor Naumov, Thomas Acton, Philip Manor, Rong Xiao, Burkhard Rost, Gaetano T Montelione, John F Hunt Microbial Informatics and Experimentation 2011, 1:6 (27 June 2011)
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The importance of metagenomic surveys to microbial ecology: or why Darwin would have been a metagenomic scientist
Jack A Gilbert, Ronald O'Dor, Nicholas King, Timothy M Vogel Microbial Informatics and Experimentation 2011, 1:5 (14 June 2011)
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Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset
Peter E Larsen, Frank R Collart, Dawn Field, Folker Meyer, Kevin P Keegan, Christopher S Henry, John McGrath, John Quinn, Jack A Gilbert Microbial Informatics and Experimentation 2011, 1:4 (14 June 2011)
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The Regulatory Network of Pseudomonas aeruginosa
Edgardo Galán-Vásquez, Beatriz Luna, Agustino Martínez-Antonio Microbial Informatics and Experimentation 2011, 1:3 (14 June 2011)
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Base-By-Base version 2: single nucleotide-level analysis of whole viral genome alignments
William Hillary, Song-Han Lin, Chris Upton Microbial Informatics and Experimentation 2011, 1:2 (14 June 2011)
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Welcome to Microbial Informatics and Experimentation
Michael J Wise, Barry L Wanner Microbial Informatics and Experimentation 2011, 1:1 (14 June 2011)
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